Insertion junction: CLIP2.001335_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001335
Chromosome:chromosome 12
Location:7216548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g559050 (1 of 1) PTHR24006//PTHR24006:SF22 - FAMILY NOT NAMED // BCDNA.LD22910 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGTACTTATGGCGACCGCGGCTGCCGCGAAAGCTTTCTGGGAACGGG
Internal bar code:TTGTAATAAGATTTTGACAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:86.4865
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCCCTGCGTCATTTAA
Suggested primer 2:TGCAATTGCGGGTGGAAAAG