Insertion junction: CLIP2.001340_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001340
Chromosome:chromosome 16
Location:5185457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTGGCGTGCAAACAATGCAACATGGAGAAAATGCACCCATGCACCC
Internal bar code:AGCTGTGCGTAAGCGTGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3329
LEAP-Seq percent confirming:98.8571
LEAP-Seq n confirming:173
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:175

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGTCCATCACGGGAGCC
Suggested primer 2:CTCATCCTGCGGTCAGTACC