Insertion junction: CLIP2.001342_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001342
Chromosome:chromosome 3
Location:7643605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204300 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACGAGCCTGCATGTTTCCATCCCAAATGCCCTCCAACACACGTGT
Internal bar code:GACGCAAAACCAGGTATGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCAGGGAGTCGTCGTTG
Suggested primer 2:TGGTGGTGGGGATCGTAGAT