Insertion junction: CLIP2.001342_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001342
Chromosome:chromosome 4
Location:642553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217946 (1 of 1) PTHR22769:SF35 - NUDIX HYDROLASE FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGGTTGGAGTTAGAGAATTGGTCCGTAACTCTGAACGTCGCAGAT
Internal bar code:AGAAGGTTTCTATTATGACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1328
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATGGCTACCGTACTTCC
Suggested primer 2:TAAACACGCCTGGATGGTCC