Insertion junction: CLIP2.001343_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001343
Chromosome:chromosome 3
Location:5850318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188250 AGP4,STA6 ADP-glucose pyrophosphorylase small subunit; (1 of 1) PTHR22572//PTHR22572:SF79 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCTAGCGTCAAGCACTACTTCCCTCGTTGCCGTGTTGGCACGTGCT
Internal bar code:CCGGCATGTATAGTTCATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3153
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTGGGTGATGGTGCAAC
Suggested primer 2:CGGCTCCTGTATGCAAATGC