Insertion junction: CLIP2.001343_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001343
Chromosome:chromosome 3
Location:5850321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188250 AGP4,STA6 ADP-glucose pyrophosphorylase small subunit; (1 of 1) PTHR22572//PTHR22572:SF79 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCGGTAGTCTGGGGTCGGGGGCTGCTCTCCGCCAGCGGCCAGCCTGC
Internal bar code:CCGGCATGTATAGTTCATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2210
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTCCTGTATGCAAATGC
Suggested primer 2:GGTTTGGGTGATGGTGCAAC