Insertion junction: CLIP2.001346_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001346
Chromosome:chromosome 13
Location:1178057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569700 OPR56,MBC1 psbC mRNA stabilization factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCACTGCCGCGGCCGCCGCGGCCCGCGTGCGCCGCCGCCGGCCGCGG
Internal bar code:TAGGATAAGTGAGTTAAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGTAGCATTGACGGCGG
Suggested primer 2:CATAGCCGCGGACCTGTATT