Insertion junction: CLIP2.001348_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001348
Chromosome:chromosome 4
Location:2626579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223000 HLM9 Histone-lysine N-methyltransferase; (1 of 1) PF12234 - RAVE protein 1 C terminal (Rav1p_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACCAAATAGGAAGCATGGGCGCGTGCCGGGGGAGCGCTGCTGGTCGA
Internal bar code:GATATCAGGACATTATTGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAAAGGGTCAGTTGTG
Suggested primer 2:CTCAAAATACGCCGCGAAGG