Insertion junction: CLIP2.001350_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001350
Chromosome:chromosome 12
Location:4492802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520600 PRPS6 (1 of 1) PTHR21011//PTHR21011:SF1 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 // 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL; Chloroplast Ribosomal Protein S6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTATTGGACGTGTCTGGCACGTGTAAACGTGGAAAGCCGATTCCATCT
Internal bar code:CTGGTTTCAAGGAGGTCGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATCACCATGCTGATTG
Suggested primer 2:ATGGATGGAGCTTGGTTGCA