Insertion junction: CLIP2.001353_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001353
Chromosome:chromosome 2
Location:586486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077150 CPLD14 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF05684 - Protein of unknown function (DUF819) (DUF819) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAACAGCACAGCAGCATGGCCCCGGGCTGTCGACACGGCTGCAGCGAT
Internal bar code:ATTCGATTTCAGCCACGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1662
LEAP-Seq percent confirming:56.1404
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTAGGATATGGCCGCAA
Suggested primer 2:ATGAGCAAGACAGCTGGACC