Insertion junction: CLIP2.001356_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001356
Chromosome:chromosome 10
Location:698188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422300 PRX6 (1 of 2) K03564 - peroxiredoxin Q/BCP (BCP, PRXQ, DOT5); Peroxiredoxin Q intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATGCCCACGCCCACCTTGAGCGCCTCGTCCACGTGCTGCTCCACGTT
Internal bar code:CCTAGACCGGGAGACGAGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGCTCCCTCTCCAGGCT
Suggested primer 2:CACACACGCACAAGACACAG