Insertion junction: CLIP2.001357_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001357
Chromosome:chromosome 16
Location:3904577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689150 SQD3,GTR23 Sulfoquinovosyldiacylglycerol synthase; (1 of 2) K06119 - sulfoquinovosyltransferase (SQD2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACATAGCACCCAGACACACAGGCACACACACACACCACACACACAC
Internal bar code:CTGTGTGCTCAACGTCAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGACAGACCGCAATCGC
Suggested primer 2:CAGTGTGGTTGAGCACGTTG