Insertion junction: CLIP2.001359_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001359
Chromosome:chromosome 6
Location:2568958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269650 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGGAAAGCTGACCGCTTTCGGCTGCTTTGCCCGCACCTCTGATTCGC
Internal bar code:CATGCTTTCACAGGTGGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2022
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTATGTGGCTGTGGGTGG
Suggested primer 2:TTTCGGAATGGATTCGGCCA