Insertion junction: CLIP2.001367_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001367
Chromosome:chromosome 1
Location:2345378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013150 CGLD35 Conserved in the Green Lineage and Diatoms; (1 of 1) K06995 - uncharacterized protein (K06995) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGAATCAGTCGCATGACTAATGCCGTGGCTCCGCGACTGTGCCTTAT
Internal bar code:AAGCTTGATTGGGGACGCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1586
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGGTGTTGTTGCCATTC
Suggested primer 2:ACTGGGCACATCACTCTTGG