Insertion junction: CLIP2.001368_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001368
Chromosome:chromosome 7
Location:3691278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337650 PDC1 Mitochondrial pyruvate dehydrogenase complex, E1 component, alpha subunit; (1 of 1) PTHR11516//PTHR11516:SF40 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR // PDHA1 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGGCCATGTGCGGGCCGGTCATCGCAGCTCCGGCGGCGCACCCACAG
Internal bar code:TCTCCACTTCAATGACTTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTTCTGGCCCTGTGGTC
Suggested primer 2:CAAAGTCAACAAGCCCAGGC