Insertion junction: CLIP2.001369_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001369
Chromosome:chromosome 12
Location:3768441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514400 (1 of 1) PTHR12802//PTHR12802:SF60 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGGCGCGCTGGGCGCGGCGGCGGCGGCCGGTGGCGGCGGCGGCGCG
Internal bar code:TTTTATGGCGGCTGTAGTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTAGAGCTAGGAGCAGCG
Suggested primer 2:CACTCACTCGGCCATTCCTT