Insertion junction: CLIP2.001375_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001375
Chromosome:chromosome 6
Location:3638691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278141 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCCGCACGCACTCGCAGCCACAGCCGGCCGCAACAGCCGCAGCCGCA
Internal bar code:TTTATACGGGGCTATTTTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCGGCTATGTCAGGTC
Suggested primer 2:GGGCCTGAAAATTGCCGTTT