Insertion junction: CLIP2.001377_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001377
Chromosome:chromosome 3
Location:6293910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191950 CGLD31 (1 of 1) PF01782 - RimM N-terminal domain (RimM); RimM-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTCTGAAGGTGGCCCCTGGTGTCCGGGGAGGGCTGGACGGGCTGGAC
Internal bar code:GCATTTAACGGAACCAGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2545
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAACGCTGTGACATGACA
Suggested primer 2:CCAGCAGCTCATACTCCTCG