Insertion junction: CLIP2.001377_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001377
Chromosome:chromosome 17
Location:5013815
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735850 (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGTGCGGACCGTGGGAGAGGCGGCGCGCGGGGTGGTGGCGGCGGCG
Internal bar code:GAAACATGGACTCCGCATTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1403
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCACTTTCTGCCTTCGC
Suggested primer 2:CGCTCATCACATGGCCAATG