Insertion junction: CLIP2.001378_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001378
Chromosome:chromosome 7
Location:5285184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349700 Tic62-NAD-2 (1 of 2) PTHR14194//PTHR14194:SF71 - NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED // PRESTALK A DIFFERENTIATION PROTEIN A; Putative dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGATTCCTGGAGGACTGGGGCAGTGTCTGTGGGTGTGAAGGTGGGTG
Internal bar code:TAATAATCTGTCCACAGCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4026
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGAACGACTTCGCGAAA
Suggested primer 2:GTTTCCACCACCTCCTCTCG