Insertion junction: CLIP2.001384_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001384
Chromosome:chromosome 16
Location:4818722
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g687450 CPLD54 (1 of 1) PTHR16254//PTHR16254:SF6 - POTASSIUM/PROTON ANTIPORTER-RELATED // K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC; potassium ion transmembrane transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTTTACATGCTTGTGTGGCATTTAGCGGGGCTGGGAGTTGCATTCTG
Internal bar code:ATTGCGTGTACTGTTTGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1029
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGTTCTGGCGTCTTGA
Suggested primer 2:CCCTGTACCGATACTGCGTC