Insertion junction: CLIP2.001385_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001385
Chromosome:chromosome 8
Location:417200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAACTGTCAGCCCATTCCGTGCAGTCCTTTCAGAAGAACTGTAAAGC
Internal bar code:GGCGAAGGCCCGTAATAGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGGGATTTGGGACTGGG
Suggested primer 2:GCTAGACTCCTCCGCGTAAC