Insertion junction: CLIP2.001391_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001391
Chromosome:chromosome 5
Location:1580151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234750 CGLD25 Conserved in the Green Lineage and Diatoms CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGTGGCGTGTGGCACTACCGTGCGCCGCAGAACCGGACATGCGGCCT
Internal bar code:AGACTTAGTTCGGGTACGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2869
LEAP-Seq percent confirming:86.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCGTGTTCCTTTTGGG
Suggested primer 2:GGGTCGTTCACGGTTTTGTG