Insertion junction: CLIP2.001393_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001393
Chromosome:chromosome 3
Location:3417239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166750 PTK3 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Putative tyrosine kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACGTGGGGTCCATCGGTTACATGGTGCGTACCAGCGGGGCCTGTCAC
Internal bar code:GCCTAACGATGGTTTAAACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTCGATGGCGTATGACA
Suggested primer 2:CTCGGCGAACTTGTAGGTGT