Insertion junction: CLIP2.001399_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001399
Chromosome:chromosome 10
Location:1221960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426292 PYK6 (1 of 3) PTHR11817//PTHR11817:SF4 - PYRUVATE KINASE // PYRUVATE KINASE; Pyruvate kinase 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCGCTGCCCCGCGCCGCCGCCCGCAGGTGGCACTGATCCAGAAGTC
Internal bar code:GCATTTTCTAATTAAGTGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:323
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCTGGCACTTCGTACTT
Suggested primer 2:CGGTAGTCCATTCCGCTCTC