Insertion junction: CLIP2.001399_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001399
Chromosome:chromosome 10
Location:1221964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426292 PYK6 (1 of 3) PTHR11817//PTHR11817:SF4 - PYRUVATE KINASE // PYRUVATE KINASE; Pyruvate kinase 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATTGGTACAGAGAAGTGTAGCGAAGTAGACAGCAGGCGTAGGAGTGCG
Internal bar code:GCATTTTCTAATTAAGTGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:449
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAGTCCATTCCGCTCTC
Suggested primer 2:TTGGCTGGCACTTCGTACTT