Insertion junction: CLIP2.001401_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001401
Chromosome:chromosome 13
Location:125916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562750 CGLD38 Conserved in the Green Lineage and Diatoms; (1 of 1) PF14234 - Domain of unknown function (DUF4336) (DUF4336) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCAGGGAGCTGGGTTAATATCATGTGTAAGGCGTTGCACTGGCGCAC
Internal bar code:AGCTCCGATATCCGGTTGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1124
LEAP-Seq percent confirming:67.6471
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTTGTTCAGGCTGTTG
Suggested primer 2:GGGGCCGGACGAAATAAAGA