Insertion junction: CLIP2.001403_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001403
Chromosome:chromosome 6
Location:3450206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278104 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCATAGGGGACTGGGCTGGGAGTTGGGAACGGGCTGCTTCGCCGCGGG
Internal bar code:AGGTTCGCAGAAGATGGGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:491
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAACGCGTGTGTGTGAT
Suggested primer 2:TTGCCGCACTCATACACTGT