Insertion junction: CLIP2.001413_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001413
Chromosome:chromosome 1
Location:3320794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021450 TPR4 Tetratricopeptide-repeat protein 4; (1 of 1) PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATGGCCCACGCATGATCCAAGCAGGCCCTCAGCCCCGCCTGGCAT
Internal bar code:CACCTGGTACCACCGGGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGCTGGACGGAAGCAAT
Suggested primer 2:CAGCCGACTATTCAGCGGAT