Insertion junction: CLIP2.001422_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001422
Chromosome:chromosome 14
Location:1125178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614850 FAP33,ANK17 Flagellar Associated Protein 33; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACACACACACACACACACACACACACACACACACACACACACACAC
Internal bar code:TGAAAGTTAGTAGAGGTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:66.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATGTATCCGGTCAAAC
Suggested primer 2:ATGTCCTGCAGGTCACAAGG