Insertion junction: CLIP2.001424_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001424
Chromosome:chromosome 10
Location:2342923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434600 TRP21,FAP148 (1 of 1) PTHR22847//PTHR22847:SF493 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED; Cation Channel Domain Flagellar Associated Protein 148 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTTGACGCGGTTGTACACCTCCCGCATCAGCGCAATCAGCATGTTGA
Internal bar code:TTGGGCAGAGTTCGGTCCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGCTCATCTACGTCTT
Suggested primer 2:GCCTGCATCTGGATCAGGTT