Insertion junction: CLIP2.001430_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001430
Chromosome:chromosome 4
Location:2855097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224300 CGL84 (1 of 22) PTHR10994 - RETICULON; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCCTCCCGCTACGTCGCCGTGGCCATGGGCGCGGACAGGCTGTGCA
Internal bar code:GTAGATAGGACTCACGGGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2033
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCAGGCCTTGACGACAG
Suggested primer 2:GGTGAGGTGCATTTGGGGTA