Insertion junction: CLIP2.001434_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001434
Chromosome:chromosome 9
Location:3061385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393876 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGCACGCAGAGGATGGGCGGAATCGGCAGGAGCCGCAAGTGTTTCA
Internal bar code:TTCGGAGTAACGTACTAGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:559
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCTGGTTGTGGTTGTGA
Suggested primer 2:GGCACTGAAATGGCTATGCG