Insertion junction: CLIP2.001435_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001435
Chromosome:chromosome 3
Location:736211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145987 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGGCGACGAGGGCGGGGACCAGGAGGGCGCGGACCTGAGTGGAGGAG
Internal bar code:TGTTATGCCTGTCCCAGGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1688
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTCTGCTGGTACTGTT
Suggested primer 2:CAGGACATGACGATACCGGG