Insertion junction: CLIP2.001442_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001442
Chromosome:chromosome 6
Location:8455245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGGAAAAGGGCAGCGAAATCGTCGTCTCGCCCGCGTGAAGAAGCAGA
Internal bar code:CATTATTCGAGTAGTCTTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTTGTGAAAGTTGTCGC
Suggested primer 2:ATAGTGGTTGGAGGAGCCCT