Insertion junction: CLIP2.001443_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001443
Chromosome:chromosome 9
Location:5932831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412100 PSAF1,PSAF (1 of 1) K02694 - photosystem I subunit III (psaF); Photosystem I reaction center subunit III 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATTGGTTTACAGTCATAGTCTTCTCGATGCCACGGTGCGTGGTTAGGC
Internal bar code:TGAATAACGAAATGCTAGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4409
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGCTACCCTTGATGTT
Suggested primer 2:GCCCTTGGCTCTGATCAAGT