Insertion junction: CLIP2.001447_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001447
Chromosome:chromosome 17
Location:3195306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721250 QilinDyf-3,FAP22,IFT38,Cluap1 (1 of 1) PF10234 - Clusterin-associated protein-1 (Cluap1); Intraflagellar Transport Protein 38 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCTCAGCAGTCTACCCCGGAGTATCACCTGCGGTTAGCTAGATATTT
Internal bar code:TATTAGTAGGTGCCTAGTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1911
LEAP-Seq percent confirming:75.8621
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCAGCTCAAAGTTTGG
Suggested primer 2:CAGCGACTCAAGAACCTGGT