Insertion junction: CLIP2.001451_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001451
Chromosome:chromosome 10
Location:284147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419700 CGL6 (1 of 4) PF05653 - Magnesium transporter NIPA (Mg_trans_NIPA); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGGCAAGTGCTAGACAGGTGCAAACCTCCGCTGGTGGAAACCGTGTT
Internal bar code:ACTCAGCTTTATTCTCATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3122
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTAGCGGCAGGTAAGGTG
Suggested primer 2:GAACACGACGTGGAAGGACT