Insertion junction: CLIP2.001457_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001457
Chromosome:chromosome 16
Location:1263256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651250 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGAGTGGCTTCATGGAGACGTCCTTAAGCAGTCGGAGCAGGCTGCTG
Internal bar code:GACCAAAGACGTGCGGCACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1366
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCTTTCCACGTGCGTTC
Suggested primer 2:ATCAGGGGCTTGAGCTTGTC