Insertion junction: CLIP2.001458_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001458
Chromosome:chromosome 4
Location:3684963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229000 IP5-2K,IPK1 (1 of 2) 2.7.1.158 - Inositol-pentakisphosphate 2-kinase / IP5 2-kinase; Inositol polyphosphate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTATAACCAACGACAGGGCTCTCAATCGAGGGCTGCCGTGACCTGGCG
Internal bar code:TTTTAAGATACCGGCAGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:394
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTGCGGTGCTACCTCAA
Suggested primer 2:TCAAAGTTCAGGGTCGGTCG