Insertion junction: CLIP2.001464_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001464
Chromosome:chromosome 12
Location:9724661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554103 CGL74 (1 of 1) PTHR26312//PTHR26312:SF0 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT PROTEIN 5; conserved expressed TPR repeat protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTACGGAGGGAACAGGCGACGGGCCCTCAGTAGTGCCAGTCACTACCA
Internal bar code:GAAACGGGGATGAGCGGTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:75
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACGCATACATCGCCAAT
Suggested primer 2:AAAGGGAAACAAAAGCGCCC