Insertion junction: CLIP2.001472_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001472
Chromosome:chromosome 3
Location:4209631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173600 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCTAGGAAGCGAAGCCCCCGCGCTCTTTTTCTGACTCCGACCAGCCT
Internal bar code:AATGGTCAGGGGTTGAATACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:426
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCTAGGTGGTCTGATGC
Suggested primer 2:GGTTGTTGTACGGGTTGCAC