Insertion junction: CLIP2.001472_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001472
Chromosome:chromosome 10
Location:4916577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453800 TSP3,CTPA3,TCP3 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2; putative Sphingomyelin phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATACTCGGTCCCCTTGTTTGCAGCCCAGAACGAAAGTGCGAGTGCTG
Internal bar code:CATATTGGGCAACTAGTGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1910
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTGGTGGTAGAGGCACG
Suggested primer 2:TGCAGCTTGTGGTGTACGAT