Insertion junction: CLIP2.001472_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001472
Chromosome:chromosome 10
Location:4916578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453800 TSP3,CTPA3,TCP3 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2; putative Sphingomyelin phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGAAAAGCCACATTACGCGGAGCAGCCCTGGCCGGGCCGGGACTTTG
Internal bar code:CATATTGGGCAACTAGTGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2956
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTTGTGGTGTACGAT
Suggested primer 2:ATGTTGGTGGTAGAGGCACG