Insertion junction: CLIP2.001474_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001474
Chromosome:chromosome 1
Location:2536715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015000 NAGK1,AGK1 (1 of 1) 2.7.2.8 - Acetylglutamate kinase; N-acetyl-l-glutamate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGACAACCCTCCCATTGTCTCGGTGTGCCAAGCCGCCCACAACCAAA
Internal bar code:GGTTGTTGCTCCCATTAGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2169
LEAP-Seq percent confirming:94.2029
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCTGCAAGTGTGTGTG
Suggested primer 2:TCACCACGGACAACTATGCC