Insertion junction: CLIP2.001478_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001478
Chromosome:chromosome 1
Location:8134126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g066917 LHCBM1 (1 of 3) K08913 - light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2); Light-harvesting Chlorophyll a/b binding protein of LHCII intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGATGGGAGTGCAAGTATCAACTCGAATTAATGTTTAATCCGCGTAGG
Internal bar code:GCTCCCGCCGGGGCAAGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2638
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCTTCAGGACATGGAGC
Suggested primer 2:TTTTCTTCGGTTCGCTCGGA