Insertion junction: CLIP2.001481_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001481
Chromosome:chromosome 1
Location:6091596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043200 CGLD6 conserved expressed protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCTTGGAACTAAAAGAGGTTACCCACAGTGACTTGAGGGGTCCTAAA
Internal bar code:GAGATAAAATGTGGGTTTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2001
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGTATGGGCTCAGGGT
Suggested primer 2:GCTATGTGTGGGAAAGGGCT