Insertion junction: CLIP2.001483_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001483
Chromosome:chromosome 11
Location:2490572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095111 VSR1 Vacuolar Sorting Receptor; (1 of 1) PTHR22765//PTHR22765:SF56 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAATCCCCCCCTGTTCCCTTAAGATTGCCTATCGTCTGCCACTTCCT
Internal bar code:TGACTTGGATGTCTAGGCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1653
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGCGTGGGATTGCAAGC
Suggested primer 2:CTCACCTCACCCCTCCCATA