Insertion junction: CLIP2.001485_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001485
Chromosome:chromosome 16
Location:3215281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAACCCACCGTGTCCGACAGCAGGATCTGACACGGGTGGCGTCGGAG
Internal bar code:ATGGCGCCACAGGGGGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2841
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCCCGTCTTTTGTGGA
Suggested primer 2:GTCCACCACATGCAGGATGA