Insertion junction: CLIP2.001485_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001485
Chromosome:chromosome 16
Location:3215284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTTGCCCACGGAGCTGGTGGCGGCGTTCAGGTGGGGCAGGCGTGCCC
Internal bar code:TGATCAAATTTTTTTACCCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1309
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCACCACATGCAGGATGA
Suggested primer 2:GCTCTCCCGTCTTTTGTGGA